# deepGene-BC

**Repository Path**: jouhpf/deepGene-BC

## Basic Information

- **Project Name**: deepGene-BC
- **Description**: No description available
- **Primary Language**: Python
- **License**: Apache-2.0
- **Default Branch**: main
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2026-03-06
- **Last Updated**: 2026-03-06

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

# deepGene-BC
a deep learning-based breast cancer subtype prediction via somatic point mutation profiles
## Requirements
* `scipy~=1.15.0`
* `numpy~=2.2.4`
* `pandas~=2.2.3`
* `joblib~=1.4.2` 
* `tqdm~=4.67.1`
* `scikit-learn~=1.6.1`
* `seaborn~=0.13.2`
* `matplotlib~=3.10.0`
* `torch~=2.7.0`

all requirements were listed in `requirements.txt`
# Usage
**Entrance**: Run `notebooks/inference.ipynb` for an example use of the model.This script can automatically select a GPU or CPU for inference.